string_network_clustering

org.string-db/string-mcp · Verify this server

Performs **network clustering** on a STRING interaction network and returns both a **network image URL** and details about each detected cluster. Use the same parameters as in the network creation step to ensure consistency. If the network already contains disconnected subgraphs, the resulting number of clusters may differ from the requested value. Dashed lines represent connections between clusters, while solid lines indicate interactions within clusters. Notes: - For small queries (≤5 proteins), the `required_score` parameter is automatically lowered to 0. - If only a single cluster is produced, try increasing `required_score`, adjusting the inflation parameter, or switching to `kmeans` for small, highly interconnected networks.